1. Development of a new sequential block finding strategy for detection of conserved sequences in riboswitches

Faegheh Golabi, Mousa Shamsi*, Mohammad Hosein Sedaaghi, Abolfazl Barzegar, Mohammad Saeid Hejazi*

Bioimpacts. 2018;8(1): 13-22. doi: 10.15171/bi.2018.03

PMCID: PMC5915704 PMID: 29713598 Scopus ID: 85044295205

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Original Research

2. Classification of seed members of five riboswitch families as short sequences based on the features extracted by Block Location-Based Feature Extraction (BLBFE) method

Faegheh Golabi , Elnaz Mehdizadeh Aghdam , Mousa Shamsi* , Mohammad Hossein Sedaaghi , Abolfazl Barzegar , Mohammad Saeid Hejazi*

BioImpacts. 2021;11(2): 101-109. doi: 10.34172/bi.2021.17

PMCID: PMC8022236 PMID: 33842280 Scopus ID: 85106631206

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Block Location-Based Feature Extraction strategy (BLBFE) method was recently introduced as an alignment-free algorithm to classify riboswitches. Employing BLBFE method accompanied by KNN or decision tree classifiers results in better performance in the classification of riboswitches.

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